Biological software developped in Serrano's laboratory

SmartCell References

When refering to SmartCell, please reference the following papers

  • M. Ander, P. Beltrao, B. Di Ventura, J. Ferkinghoff-Borg, M. Foglierini, A. Kaplan, C. Lemerle, I. Toma´ s-Oliveira and L. Serrano (2004)
    SmartCell, a framework to simulate cellular processes that combines stochastic approximation with diffusion and localisation: analysis of simple networks
    Syst. Biol., 2004, 1, pp. 129-138
  • Dublanche Y, Michalodimitrakis K, Kümmerer N, Foglierini M, Serrano L (2006)
    Noise in transcription negative feedback loops: simulation and experimental analysis
    Mol Syst Biol. 2006;2:41. Epub 2006 Aug 1
  • Kiel C., Serano L. (2009)
    Cell type-specific importance of ras-c-raf complex association rate constants for MAPK signaling
    Sci Signal. 2009 Jul 28;2(81):ra38
  • Maier T, Schmidt A, Güell M, Küehner S, Gavin AC, Aebersold R, Serrano L (2011)
    Absolute quantification of mRNA and protein and integration with protein turnover in a bacterium
    Molecular Systems Biology, in press, 2011

SmartCell is related to the following papers: